ENCFF685KEG

Library Details

Organism: Homo Sapiens
Biosample: stomach (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR418FVT
Description: Part of ENCODE experiment ENCSR418FVT. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's stomach tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 204.00 4.65 1.17 100.0 SNHG14-234 lncRNA stomach (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 228.00 5.19 1.31 100.0 SNHG14-234 lncRNA stomach (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 329.00 3.07 1.89 100.0 ENST00000655317 lncRNA stomach (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 5080.00 47.41 29.11 89.03 ENST00000655317 lncRNA stomach (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1746.00 11.48 10.00 93.77 LINC01962-202 lncRNA stomach (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 7919.00 52.08 45.38 100.0 LINC01962-202 lncRNA stomach (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 689.00 4.53 3.95 100.0 LINC01962-202 lncRNA stomach (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 4518.00 96.01 25.89 100.0 MEG8-228 lncRNA stomach (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 259.00 3.74 1.48 100.0 LIMD1-AS1-204 lncRNA stomach (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1420.00 20.49 8.14 89.82 LIMD1-AS1-204 lncRNA stomach (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 2999.00 54.29 17.18 83.31 MIR99AHG-262 lncRNA stomach (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1395.00 25.25 7.99 100.0 MIR99AHG-262 lncRNA stomach (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 170.00 69.11 0.97 97.14 MIR9-2HG-225 lncRNA stomach (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 1000.00 45.07 5.73 100.0 MEG8-233 lncRNA stomach (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 381.00 17.17 2.18 100.0 MEG8-233 lncRNA stomach (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 548.00 47.49 3.14 100.0 MEG8-234 lncRNA stomach (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 123.00 10.66 0.70 100.0 MEG8-234 lncRNA stomach (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 169.00 57.29 0.97 100.0 MEG8-240 lncRNA stomach (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 38.00 36.19 0.22 100.0 SNHG14-306 lncRNA stomach (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 384.00 9.17 2.20 100.0 ENST00000666735 lncRNA stomach (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 162.00 3.87 0.93 100.0 ENST00000666735 lncRNA stomach (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 974.00 79.90 5.58 100.0 MEG8-242 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 197.00 0.48 1.13 100.0 MEG8-244 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 706.00 1.72 4.05 100.0 MEG8-244 lncRNA stomach (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 39208.00 95.74 224.66 99.25 MEG8-244 lncRNA stomach (Tissue)