ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 222.00 5.80 1.30 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 37.00 0.97 0.22 100.0 SNHG14-234 lncRNA sigmoid colon (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 744.00 6.85 4.36 100.0 ENST00000655317 lncRNA sigmoid colon (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 6443.00 59.33 37.74 90.85 ENST00000655317 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 792.00 4.41 4.64 90.41 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 13378.00 74.53 78.36 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 978.00 5.45 5.73 100.0 LINC01962-202 lncRNA sigmoid colon (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 6017.00 95.78 35.24 100.0 MEG8-228 lncRNA sigmoid colon (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 342.00 4.65 2.00 100.0 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 2355.00 32.01 13.79 92.1 LIMD1-AS1-204 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 4721.00 64.09 27.65 83.23 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1098.00 14.91 6.43 100.0 MIR99AHG-262 lncRNA sigmoid colon (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 631.00 90.53 3.70 96.19 MIR9-2HG-225 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 376.00 44.87 2.20 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 149.00 17.78 0.87 100.0 MEG8-233 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 758.00 53.08 4.44 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 207.00 14.50 1.21 100.0 MEG8-234 lncRNA sigmoid colon (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 191.00 67.49 1.12 100.0 MEG8-240 lncRNA sigmoid colon (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 70.00 32.86 0.41 100.0 SNHG14-306 lncRNA sigmoid colon (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 1.00 0.47 0.01 100.0 SNHG14-306 lncRNA sigmoid colon (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 2.00 0.94 0.01 100.0 SNHG14-306 lncRNA sigmoid colon (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 122.00 8.83 0.71 100.0 ENST00000666735 lncRNA sigmoid colon (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 7.00 0.51 0.04 100.0 ENST00000666735 lncRNA sigmoid colon (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 963.00 88.84 5.64 100.0 MEG8-242 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 88.00 0.16 0.52 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)