ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 109.00 0.20 0.64 100.0 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 55051.00 98.83 322.45 99.72 MEG8-244 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 562.00 0.08 3.29 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 2669.00 0.39 15.63 96.98 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 1539.86 0.22 9.02 58.22 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1268.00 0.18 7.43 79.3 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 441328.00 63.96 2585.00 99.49 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 692.00 0.10 4.05 79.09 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 25426.00 3.68 148.93 98.8 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 6222.00 0.90 36.44 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 47835.00 6.93 280.19 99.51 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 633.00 0.09 3.71 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 74.00 0.01 0.43 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 548.00 0.08 3.21 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 362.00 0.05 2.12 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 282.00 0.04 1.65 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 13031.00 1.89 76.33 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 150.00 0.02 0.88 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 770.00 0.11 4.51 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 62653.00 9.08 366.98 78.7 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 2058.00 0.30 12.05 87.39 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 12.00 0.00 0.07 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 24.00 0.00 0.14 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 19923.00 2.89 116.70 100.0 SNHG1-248 lncRNA sigmoid colon (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 783.00 0.11 4.59 79.25 SNHG1-248 lncRNA sigmoid colon (Tissue)