ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 48.00 15.74 0.28 100.0 HCN2-201 protein coding sigmoid colon (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 1.00 7.69 0.01 100.0 SLC49A4-201 protein coding sigmoid colon (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 25.00 3.64 0.15 100.0 ATP5MC3-201 protein coding sigmoid colon (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 186.00 88.57 1.09 100.0 CDC25A-201 protein coding sigmoid colon (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 674.00 78.01 3.95 100.0 RUNX3-201 protein coding sigmoid colon (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 131.00 33.50 0.77 100.0 BLOC1S4-201 protein coding sigmoid colon (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 242.00 18.67 1.42 100.0 ATAD5-201 protein coding sigmoid colon (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 217.00 35.06 1.27 100.0 SLITRK5-201 protein coding sigmoid colon (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 425.00 34.52 2.49 100.0 HASPIN-201 protein coding sigmoid colon (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 191.00 97.45 1.12 100.0 ATG101-201 protein coding sigmoid colon (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 9.00 25.71 0.05 100.0 PRICKLE1-201 protein coding sigmoid colon (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 4749.00 96.60 27.82 99.25 MIR133A2-201 miRNA sigmoid colon (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 9.00 52.94 0.05 100.0 PBLD-204 protein coding sigmoid colon (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 242376.00 86.17 1419.68 98.17 MIRLET7BHG-201 lncRNA sigmoid colon (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 23548.00 8.37 137.93 84.35 MIRLET7BHG-201 lncRNA sigmoid colon (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 26.00 4.26 0.15 76.47 MIR375-201 miRNA sigmoid colon (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 584.00 95.58 3.42 99.49 MIR375-201 miRNA sigmoid colon (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 4793.00 48.69 28.07 100.0 MIR30E-201 miRNA sigmoid colon (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 4472.00 45.43 26.19 100.0 MIR30E-201 miRNA sigmoid colon (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 381.00 47.86 2.23 100.0 MIR29A-201 miRNA sigmoid colon (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 70.00 97.22 0.41 100.0 MIR345-201 miRNA sigmoid colon (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 7287.00 99.06 42.68 100.0 MIR16-2-201 miRNA sigmoid colon (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 16.00 1.18 0.09 100.0 MIR340-201 miRNA sigmoid colon (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1297.00 95.86 7.60 100.0 MIR340-201 miRNA sigmoid colon (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 669.00 60.22 3.92 100.0 MIR107-201 miRNA sigmoid colon (Tissue)