ENCFF625OBY

Library Details

Organism: Homo Sapiens
Biosample: sigmoid colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR880LXP
Description: Part of ENCODE experiment ENCSR880LXP. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's sigmoid colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 141.00 15.28 0.83 100.0 FTX-219 lncRNA sigmoid colon (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 495.00 53.63 2.90 86.99 FTX-219 lncRNA sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 204.00 1.19 1.19 64.15 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 487.00 2.85 2.85 83.53 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 9451.00 55.36 55.36 83.69 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 114.00 0.67 0.67 35.85 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 3746.00 21.94 21.94 61.15 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 218.00 1.28 1.28 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 1111.00 6.51 6.51 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 248.00 1.45 1.45 100.0 CTC1-214 protein coding sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 1021.00 3.13 5.98 73.93 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 620.00 1.90 3.63 94.51 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 40.00 0.12 0.23 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1420.00 4.35 8.32 47.7 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 44.00 0.13 0.26 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 113.00 0.35 0.66 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 57.00 0.17 0.33 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 5420.00 16.60 31.75 48.41 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 154.00 0.47 0.90 100.0 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 17907.00 54.84 104.89 85.43 ENST00000651540 lncRNA sigmoid colon (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 4031.00 0.87 23.61 100.0 MIRLET7A1HG-203 lncRNA sigmoid colon (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 1506.00 92.96 8.82 100.0 MEG8-225 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 3170.00 77.47 18.57 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 173.00 4.23 1.01 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 248.00 6.06 1.45 100.0 SNHG29-232 lncRNA sigmoid colon (Tissue)