ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 258.87 8.65 1.07 39.83 RNY1-201 misc RNA spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 14160.51 6.82 58.68 36.96 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 5946.47 2.86 24.64 67.13 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 480.00 0.23 1.99 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 1546.00 0.74 6.41 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 328.00 0.16 1.36 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 4838.69 2.33 20.05 49.97 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_71_119_+ 71–119 435.00 0.21 1.80 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 5981.00 2.88 24.79 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 955.00 0.46 3.96 100.0 RNA5SP202-201 rRNA pseudogene spleen (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 5434.00 81.25 22.52 100.0 SNORD114-9-201 snoRNA spleen (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 622.00 9.30 2.58 100.0 SNORD114-9-201 snoRNA spleen (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 605.00 4.57 2.51 100.0 Y_RNA.234-201 misc RNA spleen (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 53.00 3.97 0.22 100.0 RNA5SP141-201 rRNA pseudogene spleen (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 364.00 78.45 1.51 100.0 SNORD114-15-201 snoRNA spleen (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 156.00 12.99 0.65 100.0 ENST00000364722 snoRNA spleen (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 171.00 41.01 0.71 100.0 SNORD113-3-201 snoRNA spleen (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 6652.00 64.98 27.57 100.0 SNORD52-201 snoRNA spleen (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 725.00 45.26 3.00 100.0 SNORD114-3-201 snoRNA spleen (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 544.00 33.96 2.25 100.0 SNORD114-3-201 snoRNA spleen (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 14.00 0.87 0.06 100.0 SNORD114-3-201 snoRNA spleen (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 18.00 3.82 0.07 100.0 RNA5SP298-201 rRNA pseudogene spleen (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 479.00 73.81 1.99 100.0 SNORD113-9-201 snoRNA spleen (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 737.00 1.46 3.05 100.0 SNORD38A-201 snoRNA spleen (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 41098.00 81.41 170.31 100.0 SNORD38A-201 snoRNA spleen (Tissue)