ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 41098.00 81.41 170.31 100.0 SNORD38A-201 snoRNA spleen (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 6656.00 88.25 27.58 98.43 SNORD114-20-201 snoRNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 208.00 11.70 0.86 70.99 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 80.00 4.50 0.33 100.0 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 284.00 15.97 1.18 76.96 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 197.00 11.08 0.82 64.17 7SK.1-201 misc RNA spleen (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 1387.00 71.35 5.75 100.0 RNA5SP77-201 rRNA pseudogene spleen (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 20780.00 80.65 86.11 100.0 SNORD114-22-201 snoRNA spleen (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 4433.00 17.21 18.37 98.77 SNORD114-22-201 snoRNA spleen (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 844.00 4.57 3.50 100.0 SNORD6-201 snoRNA spleen (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 13590.00 73.59 56.32 100.0 SNORD6-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 15633.00 24.23 64.78 99.45 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 3133.00 4.86 12.98 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 445.00 0.69 1.84 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 2247.00 3.48 9.31 100.0 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 12594.00 19.52 52.19 93.63 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 9201.02 14.26 38.13 39.69 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 14100.28 21.85 58.43 60.82 SNORD82-201 snoRNA spleen (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 58548.00 94.50 242.63 96.28 MIR146B-201 miRNA spleen (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 15625.00 90.36 64.75 100.0 SNHG20-201 lncRNA spleen (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 5.00 2.34 0.02 100.0 ATP5MK-205 protein coding spleen (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 49.00 22.90 0.20 100.0 ATP5MK-205 protein coding spleen (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 12.00 20.34 0.05 100.0 LINC01556-201 lncRNA spleen (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 367.00 46.34 1.52 100.0 ATAD3A-202 protein coding spleen (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 57.00 10.65 0.24 30.48 TMC5-202 protein coding spleen (Tissue)