ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 18586.00 19.43 77.02 61.65 RNU5A-1-201 snRNA spleen (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 38.00 0.04 0.16 100.0 RNU5A-1-201 snRNA spleen (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 1923.09 2.01 7.97 52.05 RNU5A-1-201 snRNA spleen (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 11563.00 12.09 47.92 68.43 RNU5A-1-201 snRNA spleen (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 13786.00 14.41 57.13 74.86 RNU5A-1-201 snRNA spleen (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 12645.00 13.22 52.40 66.19 RNU5A-1-201 snRNA spleen (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 192.00 65.53 0.80 100.0 SNORD114-14-201 snoRNA spleen (Tissue)
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 2711.00 3.48 11.23 100.0 SNORD104-201 snoRNA spleen (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 65.00 0.08 0.27 100.0 SNORD104-201 snoRNA spleen (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 94042.00 61.84 389.72 77.32 RNA5SP358-201 rRNA pseudogene spleen (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 19.00 1.06 0.08 51.35 RNA5SP145-201 rRNA pseudogene spleen (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 6.00 37.50 0.02 100.0 Y_RNA.105-201 misc RNA spleen (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 13.00 2.49 0.05 100.0 RNY4P9-201 misc RNA spleen (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 5014.00 31.29 20.78 100.0 RNU5B-1-201 snRNA spleen (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 2661.00 16.61 11.03 100.0 RNU5B-1-201 snRNA spleen (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 112.00 0.70 0.46 100.0 RNU5B-1-201 snRNA spleen (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 72.00 3.37 0.30 98.63 RNY4P27-201 misc RNA spleen (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 1.00 0.05 0.00 50.0 RNY4P27-201 misc RNA spleen (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 273.00 10.40 1.13 100.0 Y_RNA.136-201 misc RNA spleen (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 3987.00 90.70 16.52 98.81 SNORD114-25-201 snoRNA spleen (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 1954.00 90.93 8.10 100.0 SNORD113-7-201 snoRNA spleen (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 110.00 35.14 0.46 100.0 Y_RNA.181-201 misc RNA spleen (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 624.98 20.90 2.59 63.45 RNY1-201 misc RNA spleen (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 258.87 8.65 1.07 39.83 RNY1-201 misc RNA spleen (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 8.00 0.27 0.03 100.0 RNY1-201 misc RNA spleen (Tissue)