ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 6610.55 35.97 27.39 52.67 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 451160.00 96.98 1869.65 99.21 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 1189.00 18.00 4.93 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 10358.00 34.72 42.92 57.53 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 108.00 0.02 0.45 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 368.00 0.05 1.53 81.24 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 15377.00 88.03 63.72 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 83.00 1.18 0.34 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 612225.00 99.08 2537.12 99.77 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 337.00 0.37 1.40 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 64514.00 70.35 267.35 87.94 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 197.00 41.21 0.82 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 134.00 3.52 0.56 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 409.00 19.74 1.69 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 43464.00 97.83 180.12 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 3563.00 97.16 14.77 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 23653.00 47.11 98.02 88.57 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 228.00 0.45 0.94 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 13.00 0.00 0.05 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1500.00 55.07 6.22 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 391.00 6.66 1.62 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 13.00 0.58 0.05 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 249.00 11.12 1.03 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 322.00 14.38 1.33 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA spleen (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 6.00 8.96 0.02 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA spleen (Tissue)