ENCFF534JKI

Library Details

Organism: Homo Sapiens
Biosample: spleen (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR307FBN
Description: Part of ENCODE experiment ENCSR307FBN. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's spleen tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 418.00 74.11 1.73 100.0 HCN2-201 protein coding spleen (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 9.00 1.78 0.04 100.0 ATP5MC3-201 protein coding spleen (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 192.00 86.10 0.80 100.0 CDC25A-201 protein coding spleen (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 36.00 41.86 0.15 100.0 RUNX3-201 protein coding spleen (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 48.00 61.54 0.20 100.0 BLOC1S4-201 protein coding spleen (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 316.00 17.14 1.31 100.0 ATAD5-201 protein coding spleen (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 182.00 7.83 0.75 100.0 SLITRK5-201 protein coding spleen (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 9.00 26.47 0.04 100.0 HASPIN-201 protein coding spleen (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 656.00 98.20 2.72 100.0 ATG101-201 protein coding spleen (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 5.00 31.25 0.02 100.0 PRICKLE1-201 protein coding spleen (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 12.00 100.00 0.05 100.0 MIR133A2-201 miRNA spleen (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 10.00 20.41 0.04 100.0 PBLD-204 protein coding spleen (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 234963.00 85.76 973.71 94.59 MIRLET7BHG-201 lncRNA spleen (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 13567.00 4.95 56.22 77.66 MIRLET7BHG-201 lncRNA spleen (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 4.00 4.71 0.02 50.0 MIR375-201 miRNA spleen (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 79.00 92.94 0.33 97.53 MIR375-201 miRNA spleen (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 4839.00 50.59 20.05 100.0 MIR30E-201 miRNA spleen (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 3908.00 40.86 16.20 100.0 MIR30E-201 miRNA spleen (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 582.00 36.79 2.41 100.0 MIR29A-201 miRNA spleen (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 89.00 83.96 0.37 100.0 MIR345-201 miRNA spleen (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 19701.00 98.16 81.64 100.0 MIR16-2-201 miRNA spleen (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1974.00 95.92 8.18 100.0 MIR340-201 miRNA spleen (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 5.00 0.24 0.02 100.0 MIR340-201 miRNA spleen (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 652.00 26.72 2.70 100.0 MIR107-201 miRNA spleen (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 184.00 73.31 0.76 74.8 MIR381-201 miRNA spleen (Tissue)