ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 661.00 87.55 2.18 100.0 SNORD14D-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 19.00 11.31 0.06 100.0 Y_RNA.555-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 7634.00 93.86 25.17 95.03 MIR25-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 10358.00 93.64 34.14 97.0 MIR99B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 2738.00 35.71 9.03 77.0 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 4573.00 59.65 15.07 81.38 MIR23B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 57869.00 92.76 190.76 100.0 MIR203A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 2814.00 77.82 9.28 90.25 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 376.00 10.40 1.24 100.0 MIR199B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1264.00 95.40 4.17 100.0 MIR30B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 217.00 95.18 0.72 100.0 MIR181D-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 79.00 92.94 0.26 100.0 MIR215-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 251.00 0.57 0.83 100.0 MIR181A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 73568.00 98.97 242.51 99.59 MIR191-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 211.00 79.32 0.70 86.12 MIR149-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 632.00 91.73 2.08 98.44 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 26.00 3.77 0.09 100.0 MIR181C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 32.00 54.24 0.11 100.0 MIR194-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 231.00 85.56 0.76 87.83 MIR128-2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 2467.00 82.56 8.13 91.17 MIR99A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 35519.00 89.93 117.09 94.38 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 854.00 2.16 2.82 83.97 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 492.00 1.25 1.62 100.0 MIR28-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 4008.00 81.78 13.21 100.0 MIR183-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 498.00 7.24 1.64 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)