ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 58.00 0.16 0.19 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 8094.00 22.24 26.68 96.71 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 1869.00 5.13 6.16 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 1155.00 3.17 3.81 100.0 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 4896.00 13.45 16.14 87.4 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 6693.95 18.39 22.07 40.59 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 9889.43 27.17 32.60 59.97 SNORD82-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 34781.00 93.20 114.65 94.87 MIR146B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 59.00 56.19 0.19 100.0 SNHG20-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 67.00 7.69 0.22 100.0 ATP5MK-205 protein coding esophagus squamous epithelium (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 167.00 19.17 0.55 100.0 ATP5MK-205 protein coding esophagus squamous epithelium (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 58.00 22.31 0.19 100.0 LINC01556-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 70.00 11.95 0.23 100.0 ATAD3A-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 15.00 13.04 0.05 57.69 TMC5-202 protein coding esophagus squamous epithelium (Tissue)
ENST00000382874.6 ENST00000382874.6_779_809_+ 779–809 1750.00 91.38 5.77 100.0 ZMYM2-203 protein coding esophagus squamous epithelium (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 36.00 0.85 0.12 100.0 RNVU1-7-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 6842.00 81.55 22.55 100.0 SNORD24-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 139.00 71.65 0.46 100.0 Y_RNA.389-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 169.00 0.04 0.56 100.0 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 20501.00 4.66 67.58 83.7 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 411903.00 93.69 1357.83 99.43 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 456.00 0.10 1.50 100.0 SNORD101-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 111645.00 98.41 368.03 100.0 SNORD37-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 165987.00 91.52 547.17 98.73 SNORD59A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 106.00 35.81 0.35 100.0 SNORA7B-201 snoRNA esophagus squamous epithelium (Tissue)