ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 71.00 0.07 0.23 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 1210.00 47.17 3.99 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 353.00 6.59 1.16 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 390.00 6.74 1.29 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 1524.00 26.34 5.02 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 617.00 10.67 2.03 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus squamous epithelium (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 19.00 26.76 0.06 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA esophagus squamous epithelium (Tissue)