ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 498.00 7.24 1.64 100.0 MIR145-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 5866.00 94.81 19.34 96.26 MIR186-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 16133.00 91.96 53.18 100.0 MIR200B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 67.00 70.53 0.22 100.0 MIR218-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 3174.00 92.08 10.46 95.86 MIR181B2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 2.00 100.00 0.01 100.0 MIR495-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 395570.00 88.67 1303.98 89.2 MIR10B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 8.00 3.51 0.03 100.0 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 111.65 48.97 0.37 63.8 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 97.43 42.73 0.32 45.53 MIR130B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 2971.00 47.28 9.79 100.0 MIR199A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 5.00 71.43 0.02 100.0 MIR487B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 608.56 32.11 2.01 39.14 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 1185.09 62.54 3.91 64.48 MIR93-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 700.00 84.85 2.31 95.11 MIR532-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385045.1 ENST00000385045.1_20_41_+ 20–41 236.00 87.73 0.78 100.0 MIR15B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385048.3 ENST00000385048.3_16_37_+ 16–37 186.00 78.15 0.61 100.0 MIR150-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385050.3 ENST00000385050.3_53_74_+ 53–74 3.00 60.00 0.01 100.0 MIR542-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_51_71_+ 51–71 19.00 1.87 0.06 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385051.1 ENST00000385051.1_52_74_+ 52–74 773.00 76.16 2.55 100.0 MIR500A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_29_+ 6–29 13645.00 54.22 44.98 95.04 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_47_68_+ 47–68 930.00 3.70 3.07 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_21_+ 6–21 166.00 0.66 0.55 100.0 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385092.1 ENST00000385092.1_6_25_+ 6–25 9467.00 37.62 31.21 93.01 MIR30A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1084.00 0.62 3.57 100.0 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)