ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 157.00 6.72 0.52 100.0 RNA5SP298-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 3.00 37.50 0.01 100.0 SNORD115-38-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 15.00 53.57 0.05 100.0 SNORD115-10-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 365.00 89.02 1.20 100.0 SNORD113-9-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1421.00 4.69 4.68 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 305.00 1.01 1.01 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 27690.00 91.40 91.28 100.0 SNORD38A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 1574.00 89.74 5.19 96.98 SNORD114-20-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 387.00 9.80 1.28 83.23 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 40.00 1.01 0.13 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 2.00 0.05 0.01 66.67 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 1287.00 32.59 4.24 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 82.00 2.08 0.27 65.08 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 159.00 4.03 0.52 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 149.00 3.77 0.49 65.64 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 22.00 0.56 0.07 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 2.00 0.05 0.01 100.0 7SK.1-201 misc RNA esophagus squamous epithelium (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 245.00 63.97 0.81 100.0 SNORD14C-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 8.00 53.33 0.03 100.0 SNORD115-44-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 703.00 59.27 2.32 100.0 RNA5SP77-201 rRNA pseudogene esophagus squamous epithelium (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 2636.00 78.31 8.69 100.0 SNORD114-22-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 658.00 19.55 2.17 96.48 SNORD114-22-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 19349.00 90.89 63.78 100.0 SNORD6-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 447.00 2.10 1.47 100.0 SNORD6-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 281.00 15.17 0.93 100.0 RNY3-201 misc RNA esophagus squamous epithelium (Tissue)