ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 622.00 93.53 2.05 100.0 SNORD113-5-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 238.00 92.61 0.78 100.0 MIR15A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 2.00 100.00 0.01 100.0 MIR376C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 248.00 55.61 0.82 100.0 SNHG21-206 retained intron esophagus squamous epithelium (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 13371.00 96.28 44.08 100.0 SNORD11B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 2650.00 75.54 8.74 100.0 SNORD91B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 19341.00 60.84 63.76 65.49 SNORD91A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 5665.00 48.16 18.67 97.77 MIR486-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 10600.00 28.47 34.94 51.94 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 338.00 0.91 1.11 100.0 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 779.00 2.09 2.57 100.0 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 11203.00 30.09 36.93 85.43 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 461.00 5.25 1.52 71.58 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 1768.97 20.15 5.83 52.57 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 32.00 0.36 0.11 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 434.00 4.94 1.43 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 107.00 1.22 0.35 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 255.00 2.90 0.84 35.61 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 1608.76 18.33 5.30 47.81 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 74.00 93.67 0.24 100.0 MIR7974-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 916.00 2.96 3.02 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 3382.78 10.95 11.15 38.51 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 102.00 0.33 0.34 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 10.00 0.03 0.03 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 5.00 0.02 0.02 83.33 U2.3-201 snRNA esophagus squamous epithelium (Tissue)