ENCFF476IAU

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR262TBN
Description: Part of ENCODE experiment ENCSR262TBN. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000385129.3 ENST00000385129.3_19_40_+ 19–40 1084.00 0.62 3.57 100.0 MIR27B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385189.3 ENST00000385189.3_25_47_+ 25–47 76.00 92.68 0.25 100.0 MIR196A2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385196.1 ENST00000385196.1_15_36_+ 15–36 64.00 66.67 0.21 100.0 MIR577-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385199.1 ENST00000385199.1_51_70_+ 51–70 41.00 73.21 0.14 82.0 MIR654-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385200.3 ENST00000385200.3_33_54_+ 33–54 26.00 96.30 0.09 100.0 MIR204-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385212.3 ENST00000385212.3_54_76_+ 54–76 857.00 89.93 2.83 100.0 MIR152-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385227.1 ENST00000385227.1_17_40_+ 17–40 1525.00 89.34 5.03 100.0 MIR30C1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385235.3 ENST00000385235.3_16_37_+ 16–37 109.00 74.66 0.36 100.0 MIR660-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385236.1 ENST00000385236.1_55_76_+ 55–76 135.00 2.73 0.45 100.0 MIR125B1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385236.1 ENST00000385236.1_15_37_+ 15–37 3490.00 70.68 11.50 81.47 MIR125B1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385254.3 ENST00000385254.3_16_37_+ 16–37 24.00 80.00 0.08 100.0 MIR493-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385254.3 ENST00000385254.3_57_78_+ 57–78 4.00 13.33 0.01 100.0 MIR493-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385255.3 ENST00000385255.3_23_44_+ 23–44 15377.06 10.00 50.69 18.08 MIR182-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385255.3 ENST00000385255.3_23_46_+ 23–46 89341.63 58.08 294.51 61.75 MIR182-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385259.1 ENST00000385259.1_13_34_+ 13–34 9230.00 92.82 30.43 94.4 MIR100-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385261.1 ENST00000385261.1_51_73_+ 51–73 170.00 91.89 0.56 100.0 MIR301A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385274.1 ENST00000385274.1_55_77_+ 55–77 727.00 31.23 2.40 67.0 MIR130A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385274.1 ENST00000385274.1_55_74_+ 55–74 1574.00 67.61 5.19 84.35 MIR130A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385277.1 ENST00000385277.1_8_29_+ 8–29 93620.00 98.78 308.62 99.27 MIRLET7F2-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385278.3 ENST00000385278.3_61_82_+ 61–82 125.00 72.25 0.41 100.0 MIR652-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385279.1 ENST00000385279.1_16_37_+ 16–37 1.00 100.00 0.00 100.0 MIR653-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385282.3 ENST00000385282.3_63_84_+ 63–84 983.00 75.67 3.24 100.0 MIR140-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385301.1 ENST00000385301.1_12_32_+ 12–32 36.00 13.95 0.12 100.0 MIR106B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000385301.1 ENST00000385301.1_52_71_+ 52–71 62.00 24.03 0.20 56.36 MIR106B-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000386747.1 ENST00000386747.1_4_90_+ 4–90 59702.00 32.11 196.81 96.46 SNORD83A-201 snoRNA esophagus squamous epithelium (Tissue)