ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 492.00 0.33 1.91 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 190.00 0.13 0.74 95.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 1842.00 1.25 7.15 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 111.00 0.08 0.43 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 3786.00 2.57 14.70 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 7700.00 5.24 29.90 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 28.00 0.02 0.11 100.0 GAS5-230 retained intron transverse colon (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 47.00 6.96 0.18 100.0 FTX-219 lncRNA transverse colon (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 460.00 68.15 1.79 92.74 FTX-219 lncRNA transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 333.00 0.87 1.29 61.33 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 218.00 0.57 0.85 54.36 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 16731.00 43.62 64.97 86.12 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 210.00 0.55 0.82 38.67 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 6350.00 16.55 24.66 65.13 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 1437.00 3.75 5.58 100.0 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 2245.00 5.85 8.72 100.0 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 409.00 1.07 1.59 100.0 CTC1-214 protein coding transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 324.00 1.32 1.26 69.38 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 6186.00 25.17 24.02 94.36 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 11.00 0.04 0.04 100.0 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 735.00 2.99 2.85 70.07 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 168.00 0.68 0.65 100.0 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 26.00 0.11 0.10 100.0 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 875.00 3.56 3.40 100.0 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 105.00 0.43 0.41 100.0 ENST00000651540 lncRNA transverse colon (Tissue)