ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 345.00 0.04 1.34 53.91 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 2015.00 14.59 7.82 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 318.00 3.35 1.23 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 1278530.00 98.89 4964.50 99.91 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 2671.00 0.92 10.37 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 143695.00 49.67 557.96 77.97 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 464.00 38.35 1.80 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 36.00 0.09 0.14 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 692.00 9.58 2.69 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 378608.00 98.89 1470.13 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 7984.00 95.61 31.00 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 49572.00 54.39 192.49 96.52 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 243.00 0.27 0.94 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 88.00 0.01 0.34 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 6231.00 44.33 24.19 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 678.00 2.63 2.63 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 64.00 1.83 0.25 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 560.00 16.01 2.17 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 486.00 13.89 1.89 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA transverse colon (Tissue)
TRNA-TRANSCRIPT-CHRX-3876801 tRNA-transcript-chrX-3876801_1_55_+ 1–55 11.00 3.03 0.04 100.0 TRNA-TRANSCRIPT-CHRX-3876801 Ile tRNA transverse colon (Tissue)