ENCFF381DXM

Library Details

Organism: Homo Sapiens
Biosample: transverse colon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR168XPO
Description: Part of ENCODE experiment ENCSR168XPO. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's transverse colon tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 81.00 0.33 0.31 100.0 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2102.00 8.55 8.16 39.08 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 48.00 0.20 0.19 100.0 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 7974.00 32.44 30.96 86.57 ENST00000651540 lncRNA transverse colon (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 4045.00 2.31 15.71 100.0 MIRLET7A1HG-203 lncRNA transverse colon (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 551.00 88.44 2.14 100.0 MEG8-225 lncRNA transverse colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 220005.00 95.71 854.27 100.0 SNHG29-232 lncRNA transverse colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 197.00 0.09 0.76 100.0 SNHG29-232 lncRNA transverse colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 434.00 0.19 1.69 100.0 SNHG29-232 lncRNA transverse colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 98.00 0.04 0.38 100.0 SNHG29-232 lncRNA transverse colon (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 2967.00 1.29 11.52 100.0 SNHG29-232 lncRNA transverse colon (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 3493.00 1.52 13.56 100.0 SNHG29-232 lncRNA transverse colon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 26.00 0.82 0.10 100.0 SNHG14-234 lncRNA transverse colon (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 969.00 30.56 3.76 90.73 SNHG14-234 lncRNA transverse colon (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 91.00 2.87 0.35 100.0 SNHG14-234 lncRNA transverse colon (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 29.00 0.91 0.11 100.0 SNHG14-234 lncRNA transverse colon (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 299.00 9.43 1.16 100.0 SNHG14-234 lncRNA transverse colon (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 71.00 2.24 0.28 86.59 SNHG14-234 lncRNA transverse colon (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 91.00 1.49 0.35 7.05 ENST00000655317 lncRNA transverse colon (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 681.00 11.13 2.64 100.0 ENST00000655317 lncRNA transverse colon (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 1887.00 30.85 7.33 90.63 ENST00000655317 lncRNA transverse colon (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 287.00 4.69 1.11 100.0 ENST00000655317 lncRNA transverse colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1977.00 0.44 7.68 74.1 LINC01962-202 lncRNA transverse colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 440021.00 97.09 1708.59 100.0 LINC01962-202 lncRNA transverse colon (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 1934.00 0.43 7.51 100.0 LINC01962-202 lncRNA transverse colon (Tissue)