ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 9264.00 21.01 36.48 63.34 RACK1-230 retained intron prostate gland (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 228.00 1.83 0.90 100.0 RNA5SP486-201 rRNA pseudogene prostate gland (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 6288.00 89.18 24.76 100.0 SCARNA5-201 scaRNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 8258.00 3.82 32.52 63.24 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 4159.00 1.92 16.38 72.33 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 272.00 0.13 1.07 100.0 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_15_32_+ 15–32 306.00 0.14 1.20 100.0 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_26_+ 1–26 366.00 0.17 1.44 100.0 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 467.00 0.22 1.84 79.42 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_32_+ 1–32 165490.00 76.57 651.65 97.18 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 14271.00 6.60 56.20 97.99 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 86.00 0.04 0.34 100.0 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1062.00 0.49 4.18 69.19 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 215.00 0.10 0.85 100.0 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000516507.1 ENST00000516507.1_1_90_+ 1–90 2315.00 1.07 9.12 100.0 RNY4-201 misc RNA prostate gland (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 1231.00 74.11 4.85 82.07 MIR3142HG-201 lncRNA prostate gland (Tissue)
ENST00000521127.2 ENST00000521127.2_334_410_+ 334–410 1428.00 85.92 5.62 100.0 SNHG6-204 retained intron prostate gland (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 52344.00 79.88 206.12 88.75 MIR151A-201 miRNA prostate gland (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 5411.00 8.26 21.31 100.0 MIR151A-201 miRNA prostate gland (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 1050.00 98.22 4.13 100.0 DENND3-221 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 1022.00 8.43 4.02 73.95 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 91.00 0.75 0.36 100.0 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 172.00 1.42 0.68 60.99 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 305.00 2.52 1.20 68.23 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 110.00 0.91 0.43 39.01 WDR74-204 protein coding prostate gland (Tissue)