ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000525239.5 ENST00000525239.5_22_116_+ 22–116 336.00 2.77 1.32 100.0 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 188.00 1.55 0.74 100.0 WDR74-204 protein coding prostate gland (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 284.00 2.34 1.12 100.0 WDR74-204 protein coding prostate gland (Tissue)
ENST00000527983.5 ENST00000527983.5_1320_1408_+ 1320–1408 1182.00 66.55 4.65 100.0 HSPA8-211 retained intron prostate gland (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 330.00 20.79 1.30 100.0 SCARNA9-201 lncRNA prostate gland (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 18892.00 90.99 74.39 100.0 TAF1D-215 retained intron prostate gland (Tissue)
ENST00000530769.5 ENST00000530769.5_2550_2623_+ 2550–2623 150.00 0.72 0.59 100.0 TAF1D-215 retained intron prostate gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1164_1221_+ 1164–1221 5.00 0.34 0.02 100.0 HSPA8-215 retained intron prostate gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 1208.00 83.25 4.76 100.0 HSPA8-215 retained intron prostate gland (Tissue)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 3.00 0.21 0.01 100.0 HSPA8-215 retained intron prostate gland (Tissue)
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 109.00 13.13 0.43 100.0 RPS2-215 retained intron prostate gland (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 46309.00 71.79 182.35 74.62 ENST00000548801 lncRNA prostate gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1384.00 25.72 5.45 100.0 ENST00000554988 lncRNA prostate gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 759.00 14.10 2.99 100.0 ENST00000554988 lncRNA prostate gland (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 422.00 7.84 1.66 100.0 ENST00000554988 lncRNA prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 8408.00 13.52 33.11 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 707.00 1.14 2.78 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 50152.00 80.63 197.48 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 357.00 0.57 1.41 100.0 SNHG14-220 retained intron prostate gland (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2170.00 99.22 8.54 100.0 TEKT4P2-201 transcribed unprocessed pseudogene prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 885.00 3.18 3.48 100.0 RPL4-202 retained intron prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 155.00 0.56 0.61 100.0 RPL4-202 retained intron prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 911.00 3.28 3.59 100.0 RPL4-202 retained intron prostate gland (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 22243.00 80.04 87.59 93.58 RPL4-202 retained intron prostate gland (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 6.00 0.01 0.02 100.0 ENST00000563103 lncRNA prostate gland (Tissue)