ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 229.00 21.67 0.90 100.0 HCN2-201 protein coding prostate gland (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 8.00 22.86 0.03 100.0 SLC49A4-201 protein coding prostate gland (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 24.00 4.44 0.09 100.0 ATP5MC3-201 protein coding prostate gland (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 473.00 87.27 1.86 100.0 CDC25A-201 protein coding prostate gland (Tissue)
ENST00000308873.11 ENST00000308873.11_348_362_+ 348–362 5826.00 93.17 22.94 100.0 RUNX3-201 protein coding prostate gland (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 188.00 37.30 0.74 100.0 BLOC1S4-201 protein coding prostate gland (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 137.00 12.88 0.54 100.0 ATAD5-201 protein coding prostate gland (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 196.00 7.81 0.77 100.0 SLITRK5-201 protein coding prostate gland (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 7.00 36.84 0.03 100.0 HASPIN-201 protein coding prostate gland (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 438.00 97.55 1.72 100.0 ATG101-201 protein coding prostate gland (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 22.00 64.71 0.09 100.0 PRICKLE1-201 protein coding prostate gland (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 2491.00 95.04 9.81 97.08 MIR133A2-201 miRNA prostate gland (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 2.00 15.38 0.01 100.0 PBLD-204 protein coding prostate gland (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 348438.00 90.07 1372.05 97.46 MIRLET7BHG-201 lncRNA prostate gland (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 16580.00 4.29 65.29 78.13 MIRLET7BHG-201 lncRNA prostate gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 6518.00 2.72 25.67 71.93 MIR375-201 miRNA prostate gland (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 227313.00 95.01 895.10 97.96 MIR375-201 miRNA prostate gland (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 8393.00 63.58 33.05 100.0 MIR30E-201 miRNA prostate gland (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 3953.00 29.95 15.57 100.0 MIR30E-201 miRNA prostate gland (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 625.00 44.74 2.46 100.0 MIR29A-201 miRNA prostate gland (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 126.00 78.75 0.50 100.0 MIR345-201 miRNA prostate gland (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 7605.00 99.27 29.95 100.0 MIR16-2-201 miRNA prostate gland (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 17.00 1.12 0.07 100.0 MIR340-201 miRNA prostate gland (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 1415.00 93.40 5.57 100.0 MIR340-201 miRNA prostate gland (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 845.00 57.76 3.33 100.0 MIR107-201 miRNA prostate gland (Tissue)