ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 227.00 3.55 0.89 100.0 RPL7A-207 protein coding CDS not defined prostate gland (Tissue)
ENST00000490232.3 ENST00000490232.3_219_300_+ 219–300 60.00 0.48 0.24 100.0 RN7SL2-201 misc RNA prostate gland (Tissue)
ENST00000490232.3 ENST00000490232.3_229_300_+ 229–300 427.00 3.41 1.68 9.21 RN7SL2-201 misc RNA prostate gland (Tissue)
ENST00000493449.5 ENST00000493449.5_96_109_+ 96–109 1402.00 92.24 5.52 100.0 RGS11-208 retained intron prostate gland (Tissue)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 3956.00 7.96 15.58 83.58 NOP56-217 protein coding CDS not defined prostate gland (Tissue)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 31823.00 64.03 125.31 73.29 NOP56-217 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 719.00 0.39 2.83 100.0 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 4107.00 2.22 16.17 88.92 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 746.00 0.40 2.94 41.51 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 150450.00 81.29 592.43 92.75 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 1051.00 0.57 4.14 58.49 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 2871.00 1.55 11.31 100.0 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 3080.00 1.66 12.13 100.0 RABGGTB-213 protein coding CDS not defined prostate gland (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 1251.00 26.97 4.93 100.0 GNL3-211 retained intron prostate gland (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 2713.00 58.50 10.68 100.0 GNL3-211 retained intron prostate gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 1696.00 66.88 6.68 100.0 RPL5-205 retained intron prostate gland (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 226.00 8.91 0.89 100.0 RPL5-205 retained intron prostate gland (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 32.00 0.50 0.13 100.0 ZBED9-AS1-201 lncRNA prostate gland (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 2108.00 92.54 8.30 100.0 RPS3A-206 retained intron prostate gland (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 9453.00 96.24 37.22 100.0 COX7C-203 protein coding prostate gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 4935.11 9.63 19.43 36.58 RACK1-229 protein coding prostate gland (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 14739.35 28.77 58.04 79.32 RACK1-229 protein coding prostate gland (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 22210.00 43.35 87.46 99.89 RACK1-229 protein coding prostate gland (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 4797.00 9.36 18.89 100.0 RACK1-229 protein coding prostate gland (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 9264.00 21.01 36.48 63.34 RACK1-230 retained intron prostate gland (Tissue)