ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 51.00 0.63 0.25 100.0 SNHG14-234 lncRNA testis (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 1732.00 16.90 8.63 100.0 ENST00000655317 lncRNA testis (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 4492.00 43.84 22.37 83.11 ENST00000655317 lncRNA testis (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 2971.00 4.38 14.80 97.09 LINC01962-202 lncRNA testis (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 63283.00 93.26 315.21 100.0 LINC01962-202 lncRNA testis (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 419.00 0.62 2.09 100.0 LINC01962-202 lncRNA testis (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 47395.00 91.44 236.07 100.0 MEG8-228 lncRNA testis (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 53.00 3.12 0.26 100.0 LIMD1-AS1-204 lncRNA testis (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 312.00 18.37 1.55 94.26 LIMD1-AS1-204 lncRNA testis (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 4276.00 60.05 21.30 85.61 MIR99AHG-262 lncRNA testis (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 1348.00 18.93 6.71 100.0 MIR99AHG-262 lncRNA testis (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 35.00 56.45 0.17 89.74 MIR9-2HG-225 lncRNA testis (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 2466.00 41.36 12.28 100.0 MEG8-233 lncRNA testis (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 938.00 15.73 4.67 100.0 MEG8-233 lncRNA testis (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 4427.00 55.97 22.05 100.0 MEG8-234 lncRNA testis (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 811.00 10.25 4.04 100.0 MEG8-234 lncRNA testis (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 355.00 55.64 1.77 100.0 MEG8-240 lncRNA testis (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 21.00 24.42 0.10 100.0 SNHG14-306 lncRNA testis (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 177.00 10.14 0.88 100.0 ENST00000666735 lncRNA testis (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 21.00 1.20 0.10 100.0 ENST00000666735 lncRNA testis (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 8826.00 87.87 43.96 100.0 MEG8-242 lncRNA testis (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 629.00 0.26 3.13 100.0 MEG8-244 lncRNA testis (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 1036.00 0.43 5.16 100.0 MEG8-244 lncRNA testis (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 239347.00 98.66 1192.17 99.93 MEG8-244 lncRNA testis (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 374.00 0.03 1.86 100.0 SNHG1-248 lncRNA testis (Tissue)