ENCFF195CBI

Library Details

Organism: Homo Sapiens
Biosample: testis (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR626GVP
Description: Part of ENCODE experiment ENCSR626GVP. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's testis tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 94.00 50.00 0.47 97.92 FTX-219 lncRNA testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 64.00 0.47 0.32 59.26 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 72.00 0.53 0.36 96.0 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 5394.00 39.85 26.87 84.88 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 44.00 0.33 0.22 40.74 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 2165.00 16.00 10.78 56.9 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 394.00 2.91 1.96 100.0 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 427.00 3.15 2.13 100.0 CTC1-214 protein coding testis (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 31.00 0.23 0.15 100.0 CTC1-214 protein coding testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 304.00 1.57 1.51 61.79 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 2180.00 11.28 10.86 92.53 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 56.00 0.29 0.28 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 364.00 1.88 1.81 45.96 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 12.00 0.06 0.06 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 66.00 0.34 0.33 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2732.00 14.14 13.61 41.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 138.00 0.71 0.69 100.0 ENST00000651540 lncRNA testis (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 9523.00 49.28 47.43 83.79 ENST00000651540 lncRNA testis (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 1264.00 0.62 6.30 100.0 MIRLET7A1HG-203 lncRNA testis (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 7715.00 95.87 38.43 100.0 MEG8-225 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 3260.00 69.87 16.24 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 637.00 13.65 3.17 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 205.00 4.39 1.02 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 6.00 0.13 0.03 100.0 SNHG29-232 lncRNA testis (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 388.00 4.80 1.93 100.0 SNHG14-234 lncRNA testis (Tissue)