ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 266189.00 93.26 1605.16 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 1883.00 0.66 11.35 100.0 LINC01962-202 lncRNA upper lobe of left lung (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 308.00 91.12 1.86 100.0 MEG8-228 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 1235.00 1.70 7.45 100.0 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 4390.00 6.05 26.47 97.97 LIMD1-AS1-204 lncRNA upper lobe of left lung (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 1607.00 54.02 9.69 81.82 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 732.00 24.61 4.41 100.0 MIR99AHG-262 lncRNA upper lobe of left lung (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 17.00 19.10 0.10 100.0 MIR9-2HG-225 lncRNA upper lobe of left lung (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 145.00 40.28 0.87 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 17.00 4.72 0.10 100.0 MEG8-233 lncRNA upper lobe of left lung (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 102.00 28.81 0.62 100.0 MEG8-234 lncRNA upper lobe of left lung (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 75.00 21.19 0.45 100.0 MEG8-234 lncRNA upper lobe of left lung (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 19.00 73.08 0.11 100.0 MEG8-240 lncRNA upper lobe of left lung (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 15.00 20.83 0.09 100.0 SNHG14-306 lncRNA upper lobe of left lung (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 101.00 63.52 0.61 100.0 MEG8-242 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 10504.00 97.51 63.34 99.55 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 22.00 0.20 0.13 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 99.00 0.92 0.60 100.0 MEG8-244 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 19.00 0.01 0.11 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1436.00 0.59 8.66 100.0 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 12133.00 4.96 73.16 98.96 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 794.35 0.32 4.79 68.07 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 800.00 0.33 4.82 89.29 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 9235.00 3.78 55.69 99.59 SNHG1-248 lncRNA upper lobe of left lung (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 504.00 0.21 3.04 71.39 SNHG1-248 lncRNA upper lobe of left lung (Tissue)