ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2601.00 11.59 15.68 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_26_71_+ 26–71 110.00 0.49 0.66 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408587.1 ENST00000408587.1_43_74_+ 43–74 3620.00 71.01 21.83 100.0 SNORD111B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_155_188_+ 155–188 88.00 0.53 0.53 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410361.1 ENST00000410361.1_79_116_+ 79–116 438.00 2.65 2.64 100.0 RNU2-36P-201 snRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 47485.00 93.79 286.34 99.33 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 1865.00 3.68 11.25 100.0 SNORD19C-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 321.00 49.46 1.94 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 92.00 14.18 0.55 100.0 SNORD12B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 22.00 3.97 0.13 100.0 Y_RNA.609-201 misc RNA upper lobe of left lung (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 27.00 32.53 0.16 100.0 Y_RNA.612-201 misc RNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 234.00 5.29 1.41 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 121.00 2.73 0.73 100.0 SNORD71-201 snoRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 5443.00 85.21 32.82 94.88 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 900.00 14.09 5.43 51.08 MIR194-2HG-201 lncRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 604.00 13.88 3.64 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 403.00 9.26 2.43 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 11.00 0.25 0.07 100.0 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 1154.00 26.51 6.96 76.07 SNORD62B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 2.00 40.00 0.01 100.0 MRPL32-203 nonsense mediated decay upper lobe of left lung (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 27.00 71.05 0.16 100.0 ENST00000436739 lncRNA upper lobe of left lung (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 1709.00 2.87 10.31 86.71 TMEM107-204 protein coding upper lobe of left lung (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 308.00 0.52 1.86 100.0 TMEM107-204 protein coding upper lobe of left lung (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 44901.00 75.42 270.76 93.6 TMEM107-204 protein coding upper lobe of left lung (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 273.00 25.80 1.65 100.0 SNHG16-201 lncRNA upper lobe of left lung (Tissue)