ENCFF192PKY

Library Details

Organism: Homo Sapiens
Biosample: upper lobe of left lung (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR961FIG
Description: Part of ENCODE experiment ENCSR961FIG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's upper lobe of left lung tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000390813.1 ENST00000390813.1_45_67_+ 45–67 6.00 66.67 0.04 100.0 MIR301B-201 miRNA upper lobe of left lung (Tissue)
ENST00000390851.1 ENST00000390851.1_150_165_+ 150–165 335.00 60.58 2.02 84.81 RNU1-82P-201 snRNA upper lobe of left lung (Tissue)
ENST00000390856.1 ENST00000390856.1_48_74_+ 48–74 4586.00 25.76 27.65 70.35 SNORD66-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390856.1 ENST00000390856.1_1_59_+ 1–59 231.00 1.30 1.39 100.0 SNORD66-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390856.1 ENST00000390856.1_25_76_+ 25–76 2692.00 15.12 16.23 100.0 SNORD66-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390880.2 ENST00000390880.2_45_67_+ 45–67 61.00 51.26 0.37 100.0 U3.17-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390930.1 ENST00000390930.1_207_235_+ 207–235 5802.00 91.88 34.99 100.0 SNORD17-201 snoRNA upper lobe of left lung (Tissue)
ENST00000390994.1 ENST00000390994.1_6_74_+ 6–74 376.00 76.58 2.27 100.0 SNORD72-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391007.1 ENST00000391007.1_9_77_+ 9–77 127.00 80.38 0.77 100.0 SNORD70B-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391107.1 ENST00000391107.1_62_87_+ 62–87 3090.00 56.67 18.63 93.55 RNY4P18-201 misc RNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_35_69_+ 35–69 3840.00 24.42 23.16 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_9_48_+ 9–48 1553.00 9.88 9.36 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_9_69_+ 9–69 6993.00 44.47 42.17 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000391150.1 ENST00000391150.1_9_35_+ 9–35 1370.00 8.71 8.26 100.0 SNORD69-201 snoRNA upper lobe of left lung (Tissue)
ENST00000393354.7 ENST00000393354.7_8003_8016_+ 8003–8016 62492.00 59.19 376.84 92.86 B4GALNT2-202 protein coding upper lobe of left lung (Tissue)
ENST00000393354.7 ENST00000393354.7_7988_8016_+ 7988–8016 144.00 0.14 0.87 100.0 B4GALNT2-202 protein coding upper lobe of left lung (Tissue)
ENST00000396355.5 ENST00000396355.5_35_56_+ 35–56 913.00 86.13 5.51 100.0 NDE1-202 protein coding upper lobe of left lung (Tissue)
ENST00000401182.3 ENST00000401182.3_11_31_+ 11–31 9.00 100.00 0.05 100.0 MIR450B-201 miRNA upper lobe of left lung (Tissue)
ENST00000401258.3 ENST00000401258.3_48_71_+ 48–71 56.00 17.34 0.34 100.0 MIR887-201 miRNA upper lobe of left lung (Tissue)
ENST00000401280.3 ENST00000401280.3_49_69_+ 49–69 8.00 100.00 0.05 100.0 MIR889-201 miRNA upper lobe of left lung (Tissue)
ENST00000408406.1 ENST00000408406.1_32_53_+ 32–53 38.00 70.37 0.23 100.0 MIR548K-201 miRNA upper lobe of left lung (Tissue)
ENST00000408479.1 ENST00000408479.1_72_91_+ 72–91 515.00 67.32 3.11 100.0 MIR320B2-201 miRNA upper lobe of left lung (Tissue)
ENST00000408537.1 ENST00000408537.1_15_35_+ 15–35 8.00 100.00 0.05 100.0 MIR1271-201 miRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_36_+ 4–36 2601.00 11.59 15.68 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)
ENST00000408573.1 ENST00000408573.1_4_52_+ 4–52 474.00 2.11 2.86 100.0 SNORD100-201 snoRNA upper lobe of left lung (Tissue)