ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 484.45 0.40 1.84 11.93 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 9683.00 8.08 36.82 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 1417.00 1.18 5.39 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 555.00 0.46 2.11 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 30372.69 25.34 115.49 43.21 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 42917.85 35.81 163.19 59.48 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 4050.47 3.38 15.40 40.28 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 1185.00 0.99 4.51 71.21 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 2433.00 2.03 9.25 100.0 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 7480.25 6.24 28.44 63.92 ENST00000756336 lncRNA gastroesophageal sphincter (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 14.00 0.58 0.05 100.0 ENST00000756452 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 53680.00 64.35 204.11 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 7162.00 8.59 27.23 100.0 ENST00000760093 lncRNA gastroesophageal sphincter (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 28306.00 85.52 107.63 91.53 SNHG14-356 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 2702.00 2.19 10.27 39.01 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 12.00 0.01 0.05 100.0 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 82487.00 66.80 313.64 95.47 LINC02806-241 lncRNA gastroesophageal sphincter (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 6427.00 95.70 24.44 100.0 EHBP1-AS1-210 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 904.00 7.85 3.44 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 7438.00 64.56 28.28 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 573.00 4.97 2.18 100.0 ENST00000770398 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 639.00 4.36 2.43 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 47.00 0.32 0.18 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 9086.00 61.96 34.55 93.52 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 868.00 5.92 3.30 100.0 ENST00000771298 lncRNA gastroesophageal sphincter (Tissue)