ENCFF181JNF

Library Details

Organism: Homo Sapiens
Biosample: gastroesophageal sphincter (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR866ZSG
Description: Part of ENCODE experiment ENCSR866ZSG. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's esophagogastric junction tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 62.00 5.33 0.24 100.0 ENST00000772672 lncRNA gastroesophageal sphincter (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 10.00 0.86 0.04 100.0 ENST00000772672 lncRNA gastroesophageal sphincter (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 63.00 13.40 0.24 100.0 ENST00000773843 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 41109.00 51.42 156.31 93.15 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 37775.00 47.25 143.63 98.25 SNHG12-223 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 14370.00 4.40 54.64 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 218798.00 67.01 831.94 86.61 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 248.00 0.08 0.94 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 1455.85 0.45 5.54 41.22 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 12431.39 3.81 47.27 68.71 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 3747.66 1.15 14.25 18.65 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 10831.00 3.32 41.18 95.93 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 562.00 0.17 2.14 100.0 SNHG25-206 lncRNA gastroesophageal sphincter (Tissue)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 180.00 84.11 0.68 85.71 MIR155HG-205 lncRNA gastroesophageal sphincter (Tissue)
ENST00000784740.1 ENST00000784740.1_245_265_+ 245–265 22.00 73.33 0.08 100.0 ENST00000784740 lncRNA gastroesophageal sphincter (Tissue)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 3.00 0.06 0.01 100.0 ENST00000785178 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 1200.00 4.13 4.56 71.56 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 9439.00 32.51 35.89 100.0 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 477.00 1.64 1.81 43.84 ENST00000786284 lncRNA gastroesophageal sphincter (Tissue)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 9.00 0.52 0.03 60.0 ENST00000788343 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_7_63_+ 7–63 1726.86 40.75 6.57 54.24 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_9_63_+ 9–63 1052.74 24.84 4.00 33.06 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)
ENST00000797550.1 ENST00000797550.1_9_52_+ 9–52 170.00 4.01 0.65 88.08 ENST00000797550 lncRNA gastroesophageal sphincter (Tissue)
ENST00000806893.1 ENST00000806893.1_425_447_+ 425–447 16371.00 90.20 62.25 96.47 MIR181A1HG-212 lncRNA gastroesophageal sphincter (Tissue)
ENST00000806893.1 ENST00000806893.1_465_486_+ 465–486 25.00 0.14 0.10 100.0 MIR181A1HG-212 lncRNA gastroesophageal sphincter (Tissue)