ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1338.00 0.53 11.46 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 5266.00 2.07 45.10 92.06 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 237.00 0.09 2.03 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 28.00 0.01 0.24 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 77.00 0.03 0.66 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 144580.00 56.85 1238.24 99.91 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1037.00 0.41 8.88 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 13257.00 5.21 113.54 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1728.00 0.68 14.80 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 680.00 0.27 5.82 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 9167.00 3.60 78.51 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 21.00 0.01 0.18 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 602.00 0.24 5.16 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 940.00 0.37 8.05 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 10165.00 4.00 87.06 77.65 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 8807.00 3.46 75.43 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 11.00 0.00 0.09 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 194.00 0.08 1.66 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 2866.00 1.13 24.55 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 40826.00 16.05 349.65 100.0 GAS5-230 retained intron right lobe of liver (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 43.00 10.89 0.37 100.0 FTX-219 lncRNA right lobe of liver (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 255.00 64.56 2.18 90.75 FTX-219 lncRNA right lobe of liver (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 267.00 0.48 2.29 34.01 CTC1-214 protein coding right lobe of liver (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 730.00 1.30 6.25 84.49 CTC1-214 protein coding right lobe of liver (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 32365.00 57.85 277.19 83.52 CTC1-214 protein coding right lobe of liver (Tissue)