ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 1944.00 13.53 16.65 56.14 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 1000.00 0.52 8.56 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 1162.00 0.25 9.95 65.58 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 10644.00 81.53 91.16 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 165.00 0.87 1.41 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 194749.00 93.37 1667.91 99.65 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 22.00 0.05 0.19 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 18927.00 38.99 162.10 81.67 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 50.00 4.94 0.43 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 189.00 3.95 1.62 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27235509 tRNA-transcript-chr6-27235509_1_33_+ 1–33 61.00 0.90 0.52 100.0 TRNA-TRANSCRIPT-CHR6-27235509 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27280270 tRNA-transcript-chr6-27280270_1_33_+ 1–33 69622.00 95.42 596.27 100.0 TRNA-TRANSCRIPT-CHR6-27280270 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27290626 tRNA-transcript-chr6-27290626_1_33_+ 1–33 1035.00 83.67 8.86 100.0 TRNA-TRANSCRIPT-CHR6-27290626 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 25281.00 27.17 216.52 93.61 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 1494.00 1.61 12.80 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 28.00 0.01 0.24 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 12517.00 68.02 107.20 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 473.00 2.37 4.05 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 35.00 0.40 0.30 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 2313.00 26.23 19.81 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA right lobe of liver (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 1558.00 17.67 13.34 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA right lobe of liver (Tissue)