ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 209.00 0.72 1.79 64.51 U2.3-201 snRNA right lobe of liver (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 7051.00 24.34 60.39 100.0 U2.3-201 snRNA right lobe of liver (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 413.00 1.43 3.54 100.0 U2.3-201 snRNA right lobe of liver (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 537.00 2.50 4.60 100.0 U2.6-201 snRNA right lobe of liver (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 37.00 0.16 0.32 21.26 ENST00000619323 lncRNA right lobe of liver (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 21492.00 94.60 184.07 98.58 ENST00000619323 lncRNA right lobe of liver (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 1271.00 24.55 10.89 100.0 SCARNA4-202 scaRNA right lobe of liver (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 541.00 80.87 4.63 100.0 ENST00000625572 miRNA right lobe of liver (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 22496.00 94.24 192.67 100.0 ENST00000630615 snoRNA right lobe of liver (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 928.00 22.57 7.95 100.0 DMRT2-209 protein coding right lobe of liver (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 2455.00 59.72 21.03 100.0 DMRT2-209 protein coding right lobe of liver (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 1157.00 44.86 9.91 100.0 SNORD98-201 snoRNA right lobe of liver (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 792.00 30.71 6.78 100.0 SNORD98-201 snoRNA right lobe of liver (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 40572.28 63.80 347.48 67.95 MIR106AHG-201 lncRNA right lobe of liver (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 3.41 0.01 0.03 85.2 MIR106AHG-201 lncRNA right lobe of liver (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 132.00 52.38 1.13 100.0 MEG8-222 lncRNA right lobe of liver (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 32.00 12.70 0.27 100.0 MEG8-222 lncRNA right lobe of liver (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 96.00 5.63 0.82 100.0 SNHG14-224 lncRNA right lobe of liver (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 325.00 19.06 2.78 83.55 SNHG14-224 lncRNA right lobe of liver (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 215.00 12.61 1.84 81.75 SNHG14-224 lncRNA right lobe of liver (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 13596.28 4.63 116.44 45.05 5S_rRNA.20-201 rRNA pseudogene right lobe of liver (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 2782.00 28.43 23.83 100.0 HSPA9-211 retained intron right lobe of liver (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 2666.00 27.24 22.83 65.31 HSPA9-211 retained intron right lobe of liver (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 3968.00 50.48 33.98 100.0 DNM3OS-205 lncRNA right lobe of liver (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 528.00 0.21 4.52 100.0 GAS5-230 retained intron right lobe of liver (Tissue)