ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 896.00 3.28 7.67 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 47.00 0.05 0.40 100.0 ENST00000563103 lncRNA right lobe of liver (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 8745.00 60.98 74.90 100.0 RPL4-207 retained intron right lobe of liver (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 1542.00 10.75 13.21 100.0 RPL4-207 retained intron right lobe of liver (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 50932.00 81.46 436.20 95.6 ENST00000565336 lncRNA right lobe of liver (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 4002.00 6.40 34.27 65.52 ENST00000565336 lncRNA right lobe of liver (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2506.00 38.46 21.46 100.0 RBMX-210 retained intron right lobe of liver (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 1654.00 25.38 14.17 100.0 RBMX-210 retained intron right lobe of liver (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 15.00 0.23 0.13 4.75 RBMX-210 retained intron right lobe of liver (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 855.00 53.11 7.32 100.0 RPL4-214 retained intron right lobe of liver (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6436.79 24.42 55.13 44.6 POLG-DT-202 lncRNA right lobe of liver (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 10722.90 40.68 91.84 77.0 POLG-DT-202 lncRNA right lobe of liver (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 357.00 1.35 3.06 100.0 POLG-DT-202 lncRNA right lobe of liver (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 835.00 9.61 7.15 100.0 ENST00000570843 lncRNA right lobe of liver (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 336.00 48.14 2.88 100.0 MIR497HG-207 lncRNA right lobe of liver (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 63469.00 97.54 543.58 98.1 MIR22HG-212 lncRNA right lobe of liver (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 837.00 60.39 7.17 67.17 SNORD53B-201 snoRNA right lobe of liver (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 409.00 29.51 3.50 32.83 SNORD53B-201 snoRNA right lobe of liver (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 72.00 19.05 0.62 100.0 ENST00000578036 lncRNA right lobe of liver (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 444.00 88.98 3.80 100.0 RPL23A-207 protein coding right lobe of liver (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 307.00 96.24 2.63 100.0 MIR744-201 miRNA right lobe of liver (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 255.00 73.70 2.18 100.0 MIR378C-201 miRNA right lobe of liver (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 2766.00 74.86 23.69 85.19 MIR142HG-201 lncRNA right lobe of liver (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 6.00 0.16 0.05 100.0 MIR142HG-201 lncRNA right lobe of liver (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 241.00 6.52 2.06 21.61 MIR142HG-201 lncRNA right lobe of liver (Tissue)