ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 23.28 0.01 0.20 31.46 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 37.46 0.01 0.32 50.63 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 374974.00 88.91 3211.43 94.15 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 45071.00 10.69 386.01 92.04 RPL23A-208 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 3688.00 6.84 31.59 83.21 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 10241.00 19.00 87.71 53.67 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 627.00 1.16 5.37 100.0 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 34784.00 64.54 297.90 95.19 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 2322.00 4.31 19.89 88.42 RPL17-211 retained intron right lobe of liver (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 6.00 11.54 0.05 18.75 ENST00000582320 lncRNA right lobe of liver (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 11.00 21.15 0.09 100.0 ENST00000582320 lncRNA right lobe of liver (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 8618.00 20.39 73.81 100.0 RPL17-214 retained intron right lobe of liver (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 21411.65 50.66 183.38 68.19 RPL17-214 retained intron right lobe of liver (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 9140.25 21.63 78.28 28.72 RPL17-214 retained intron right lobe of liver (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 546682.00 98.93 4682.01 99.93 SNORD43-201 snoRNA right lobe of liver (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 112.00 0.02 0.96 100.0 SNORD43-201 snoRNA right lobe of liver (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 44.00 28.39 0.38 100.0 MIR151B-201 miRNA right lobe of liver (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 133.00 2.16 1.14 100.0 SNORD3A-201 snoRNA right lobe of liver (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 1372.00 17.48 11.75 100.0 NSRP1-214 protein coding right lobe of liver (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 4906.00 62.50 42.02 85.43 NSRP1-214 protein coding right lobe of liver (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 244.00 8.74 2.09 92.78 MIR23AHG-201 lncRNA right lobe of liver (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 959.00 34.35 8.21 71.78 MIR23AHG-201 lncRNA right lobe of liver (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 562.00 20.13 4.81 96.07 MIR23AHG-201 lncRNA right lobe of liver (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 73.00 2.61 0.63 54.48 MIR23AHG-201 lncRNA right lobe of liver (Tissue)
ENST00000590797.5 ENST00000590797.5_2254_2275_+ 2254–2275 7122.00 30.76 61.00 100.0 MIR122HG-201 lncRNA right lobe of liver (Tissue)