ENCFF158HXL

Library Details

Organism: Homo Sapiens
Biosample: right lobe of liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR603XUX
Description: Part of ENCODE experiment ENCSR603XUX. The libraries contained in this Experiment come from tissue sub-sections of a 53 year old female's right lobe of liver tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 2003.00 3.61 17.15 68.97 RNY4-201 misc RNA right lobe of liver (Tissue)
ENST00000517927.2 ENST00000517927.2_384_405_+ 384–405 3095.00 78.65 26.51 86.43 MIR3142HG-201 lncRNA right lobe of liver (Tissue)
ENST00000521276.3 ENST00000521276.3_47_68_+ 47–68 27603.00 77.33 236.40 85.58 MIR151A-201 miRNA right lobe of liver (Tissue)
ENST00000521276.3 ENST00000521276.3_11_31_+ 11–31 2661.00 7.45 22.79 100.0 MIR151A-201 miRNA right lobe of liver (Tissue)
ENST00000523308.5 ENST00000523308.5_614_626_+ 614–626 3939.00 99.37 33.74 100.0 DENND3-221 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_93_116_+ 93–116 1875.00 6.89 16.06 76.16 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_155_187_+ 155–187 115.00 0.42 0.98 100.0 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_50_116_+ 50–116 758.00 2.78 6.49 100.0 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_90_116_+ 90–116 851.00 3.12 7.29 54.38 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_88_116_+ 88–116 714.00 2.62 6.11 45.62 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000525239.5 ENST00000525239.5_78_116_+ 78–116 1364.00 5.01 11.68 100.0 WDR74-204 protein coding right lobe of liver (Tissue)
ENST00000530422.1 ENST00000530422.1_78_109_+ 78–109 210.00 23.23 1.80 100.0 SCARNA9-201 lncRNA right lobe of liver (Tissue)
ENST00000530769.5 ENST00000530769.5_2551_2618_+ 2551–2618 36573.00 97.13 313.23 100.0 TAF1D-215 retained intron right lobe of liver (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 148898.00 77.33 1275.22 78.97 ENST00000548801 lncRNA right lobe of liver (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 1488.00 30.73 12.74 100.0 ENST00000554988 lncRNA right lobe of liver (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 207.00 4.28 1.77 100.0 ENST00000554988 lncRNA right lobe of liver (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 166.00 1.20 1.42 100.0 SNHG14-220 retained intron right lobe of liver (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 107.00 0.78 0.92 100.0 SNHG14-220 retained intron right lobe of liver (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 12922.00 93.77 110.67 100.0 SNHG14-220 retained intron right lobe of liver (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 13.00 0.09 0.11 100.0 SNHG14-220 retained intron right lobe of liver (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 6255.00 99.32 53.57 100.0 TEKT4P2-201 transcribed unprocessed pseudogene right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 3155.00 11.55 27.02 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 4.00 0.01 0.03 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 655.00 2.40 5.61 100.0 RPL4-202 retained intron right lobe of liver (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 19282.00 70.60 165.14 92.63 RPL4-202 retained intron right lobe of liver (Tissue)