ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 2498.00 76.07 11.18 100.0 SNORD6-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 26.00 0.69 0.12 100.0 RNY3-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 3831.00 32.79 17.14 98.79 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 239.00 2.05 1.07 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 472.00 4.04 2.11 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 2392.59 20.48 10.71 65.03 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 642.00 5.49 2.87 100.0 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 1233.00 10.55 5.52 89.41 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 1245.71 10.66 5.57 33.86 SNORD82-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 4192.00 95.60 18.76 97.35 MIR146B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 95.00 48.97 0.43 100.0 SNHG20-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000369825.6 ENST00000369825.6_405_425_+ 405–425 6.00 2.78 0.03 100.0 ATP5MK-205 protein coding esophagus muscularis mucosa (Tissue)
ENST00000369825.6 ENST00000369825.6_444_466_+ 444–466 76.00 35.19 0.34 100.0 ATP5MK-205 protein coding esophagus muscularis mucosa (Tissue)
ENST00000377186.4 ENST00000377186.4_697_717_+ 697–717 2.00 3.77 0.01 100.0 LINC01556-201 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000378755.9 ENST00000378755.9_1289_1300_+ 1289–1300 123.00 48.62 0.55 100.0 ATAD3A-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000381414.8 ENST00000381414.8_4377_4392_+ 4377–4392 6.00 18.18 0.03 50.0 TMC5-202 protein coding esophagus muscularis mucosa (Tissue)
ENST00000383858.1 ENST00000383858.1_151_164_+ 151–164 15.00 0.80 0.07 100.0 RNVU1-7-201 snRNA esophagus muscularis mucosa (Tissue)
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 870.00 38.82 3.89 100.0 SNORD24-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 336.00 50.00 1.50 100.0 Y_RNA.389-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 37115.00 82.52 166.09 99.18 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 585.00 1.30 2.62 76.87 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 762.00 1.69 3.41 100.0 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 498.00 1.11 2.23 100.0 SNORD101-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 20976.00 96.58 93.87 100.0 SNORD37-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 492397.00 96.98 2203.50 99.34 SNORD59A-201 snoRNA esophagus muscularis mucosa (Tissue)