ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 9.00 5.66 0.04 100.0 SNORA7B-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 157.00 99.37 0.70 100.0 SNORD14D-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 36.00 9.18 0.16 100.0 Y_RNA.555-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 5669.00 93.47 25.37 94.7 MIR25-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 26774.00 93.14 119.81 97.99 MIR99B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 14093.00 59.38 63.07 83.85 MIR23B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 8990.00 37.88 40.23 81.31 MIR23B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 11.00 26.19 0.05 100.0 MIR203A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 171.00 4.37 0.77 100.0 MIR199B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 3328.00 85.12 14.89 91.78 MIR199B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 1677.00 94.69 7.50 100.0 MIR30B-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 894.00 94.90 4.00 100.0 MIR181D-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 2.00 50.00 0.01 100.0 MIR508-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 44.00 89.80 0.20 100.0 MIR215-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 595.00 0.92 2.66 100.0 MIR181A2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 25771.00 98.74 115.33 99.39 MIR191-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 22.00 70.97 0.10 75.86 MIR149-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1252.00 92.26 5.60 98.74 MIR181C-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 52.00 3.83 0.23 100.0 MIR181C-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 18.00 78.26 0.08 100.0 MIR194-1-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 105.00 77.21 0.47 77.78 MIR128-2-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 554.00 82.56 2.48 90.67 MIR99A-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 1467.00 0.74 6.56 100.0 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 174127.00 88.18 779.23 91.22 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 1428.00 0.72 6.39 86.13 MIR28-201 miRNA esophagus muscularis mucosa (Tissue)