ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 326.00 11.98 1.46 100.0 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 13.00 0.48 0.06 100.0 SNORD114-3-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 42.00 2.39 0.19 100.0 RNA5SP298-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 147.00 73.13 0.66 100.0 SNORD115-38-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 605.00 63.55 2.71 100.0 SNORD115-10-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 324.00 78.83 1.45 100.0 SNORD113-9-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 24.00 26.97 0.11 100.0 SNORD115-20-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 15316.00 83.17 68.54 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 197.00 1.07 0.88 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1734.00 9.42 7.76 100.0 SNORD38A-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 2202.00 87.04 9.85 97.0 SNORD114-20-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 211.00 16.68 0.94 84.74 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 112.00 8.85 0.50 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 1.00 0.08 0.00 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 94.00 7.43 0.42 52.22 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 22.00 1.74 0.10 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 11.00 0.87 0.05 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 157.00 12.41 0.70 80.51 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 11.00 0.87 0.05 100.0 7SK.1-201 misc RNA esophagus muscularis mucosa (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 568.00 65.82 2.54 100.0 SNORD14C-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 133.00 64.56 0.60 100.0 SNORD115-44-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365394.1 ENST00000365394.1_85_96_+ 85–96 37.00 9.32 0.17 100.0 RNA5SP77-201 rRNA pseudogene esophagus muscularis mucosa (Tissue)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 4795.00 49.26 21.46 100.0 SNORD114-22-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 4554.00 46.78 20.38 97.37 SNORD114-22-201 snoRNA esophagus muscularis mucosa (Tissue)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 150.00 4.57 0.67 100.0 SNORD6-201 snoRNA esophagus muscularis mucosa (Tissue)