ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_53_+ 1–53 7237.00 38.06 32.39 86.85 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27547752 tRNA-transcript-chr6-27547752_1_41_+ 1–41 152.00 0.80 0.68 100.0 TRNA-TRANSCRIPT-CHR6-27547752 Gln tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-27753400 tRNA-transcript-chr6-27753400_1_54_+ 1–54 10.00 0.00 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27753400 Val tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-28658237 tRNA-transcript-chr6-28658237_1_22_+ 1–22 613.00 42.90 2.74 100.0 TRNA-TRANSCRIPT-CHR6-28658237 Ala tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHR6-28951029 tRNA-transcript-chr6-28951029_13_32_+ 13–32 60.00 1.35 0.27 100.0 TRNA-TRANSCRIPT-CHR6-28951029 Lys tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_69_+ 1–69 267.00 8.91 1.19 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_42_+ 1–42 518.00 17.28 2.32 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus muscularis mucosa (Tissue)
TRNA-TRANSCRIPT-CHRM-3230 tRNA-transcript-chrM-3230_1_18_+ 1–18 101.00 3.37 0.45 100.0 TRNA-TRANSCRIPT-CHRM-3230 Leu tRNA esophagus muscularis mucosa (Tissue)