ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 1014.57 41.98 4.54 67.96 SNHG14-312 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 16.00 0.66 0.07 100.0 SNHG14-312 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 70.00 0.22 0.31 100.0 MEG8-244 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 86.00 0.27 0.38 100.0 MEG8-244 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 31467.00 98.46 140.82 99.76 MEG8-244 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 632.00 0.14 2.83 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 9686.00 2.22 43.35 99.45 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 809.78 0.19 3.62 67.09 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 1037.00 0.24 4.64 62.43 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 118459.00 27.13 530.11 99.36 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 553.00 0.13 2.47 77.89 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 29114.00 6.67 130.29 98.53 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 3721.00 0.85 16.65 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 53488.00 12.25 239.36 99.92 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 92.00 0.02 0.41 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 39.00 0.01 0.17 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 403.00 0.09 1.80 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 34.00 0.01 0.15 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 209.00 0.05 0.94 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 203.00 0.05 0.91 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 560.00 0.13 2.51 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 88.00 0.02 0.39 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 921.00 0.21 4.12 100.0 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 36806.00 8.43 164.71 79.49 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 124889.00 28.60 558.88 99.32 SNHG1-248 lncRNA esophagus muscularis mucosa (Tissue)