ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000658801.2 ENST00000658801.2_139_214_+ 139–214 127.00 1.74 0.57 100.0 LIMD1-AS1-204 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000658801.2 ENST00000658801.2_178_214_+ 178–214 1132.00 15.48 5.07 94.41 LIMD1-AS1-204 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000659483.3 ENST00000659483.3_1071_1093_+ 1071–1093 3734.00 65.30 16.71 83.03 MIR99AHG-262 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000659483.3 ENST00000659483.3_1110_1131_+ 1110–1131 560.00 9.79 2.51 100.0 MIR99AHG-262 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000660376.1 ENST00000660376.1_1_78_+ 1–78 7.00 5.26 0.03 100.0 SNHG14-266 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000660956.1 ENST00000660956.1_2_92_+ 2–92 175.00 74.15 0.78 100.0 SNHG14-270 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661541.1 ENST00000661541.1_446_534_+ 446–534 386.00 2.06 1.73 100.0 SNHG14-275 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661688.1 ENST00000661688.1_928_950_+ 928–950 377.00 91.73 1.69 96.92 MIR9-2HG-225 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661815.1 ENST00000661815.1_36_69_+ 36–69 309.00 46.12 1.38 100.0 MEG8-233 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661815.1 ENST00000661815.1_2_70_+ 2–70 104.00 15.52 0.47 100.0 MEG8-233 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661889.1 ENST00000661889.1_1145_1233_+ 1145–1233 2673.00 4.66 11.96 100.0 SNHG14-278 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000661889.1 ENST00000661889.1_2_92_+ 2–92 49911.00 86.93 223.35 95.78 SNHG14-278 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000662228.1 ENST00000662228.1_1206_1269_+ 1206–1269 492.00 44.28 2.20 100.0 MEG8-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000662228.1 ENST00000662228.1_1205_1272_+ 1205–1272 230.00 20.70 1.03 100.0 MEG8-234 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663187.1 ENST00000663187.1_2_76_+ 2–76 834.00 94.13 3.73 100.0 SNHG17-252 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663945.1 ENST00000663945.1_3_89_+ 3–89 2389.00 10.69 10.69 58.45 SNHG14-288 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 18928.00 84.70 84.70 97.62 SNHG14-288 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 8.00 3.98 0.04 100.0 SNHG14-295 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 103.00 59.88 0.46 100.0 MEG8-240 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 4587.00 48.18 20.53 100.0 SNHG14-303 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 25.00 6.33 0.11 100.0 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 256.00 64.81 1.15 97.34 SNHG14-306 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 11.00 3.93 0.05 100.0 ENST00000666735 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 973.00 79.30 4.35 100.0 MEG8-242 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 485.44 20.08 2.17 32.51 SNHG14-312 lncRNA esophagus muscularis mucosa (Tissue)