ENCFF106XDA

Library Details

Organism: Homo Sapiens
Biosample: esophagus muscularis mucosa (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR295NAK
Description: Part of ENCODE experiment ENCSR295NAK. The libraries contained in this Experiment come from tissue sub-sections of a 51 year old female's muscle layer of esophagus tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 202845.00 47.56 907.74 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 75.00 0.02 0.34 100.0 GAS5-230 retained intron esophagus muscularis mucosa (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 54.00 6.84 0.24 100.0 FTX-219 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 438.00 55.44 1.96 90.68 FTX-219 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 210.00 3.17 0.94 42.25 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 113.00 1.71 0.51 84.96 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 2376.00 35.87 10.63 87.32 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 287.00 4.33 1.28 57.75 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 690.00 10.42 3.09 54.85 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 110.00 1.66 0.49 100.0 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 175.00 2.64 0.78 100.0 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 48.00 0.72 0.21 100.0 CTC1-214 protein coding esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 1954.00 3.10 8.74 78.29 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 342.00 0.54 1.53 93.96 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 68.00 0.11 0.30 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 785.00 1.24 3.51 52.26 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 7.00 0.01 0.03 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 31.00 0.05 0.14 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 214.00 0.34 0.96 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 200.00 0.32 0.90 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 58.00 0.09 0.26 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 2773.00 4.40 12.41 13.41 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 560.00 0.89 2.51 100.0 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 51010.00 80.89 228.27 94.29 ENST00000651540 lncRNA esophagus muscularis mucosa (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 2939.00 0.82 13.15 100.0 MIRLET7A1HG-203 lncRNA esophagus muscularis mucosa (Tissue)