ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 7.00 0.04 0.01 63.64 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 9.00 0.05 0.02 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 2586.47 14.00 4.72 67.43 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 3651.00 19.77 6.66 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 68.00 0.37 0.12 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 256.00 1.39 0.47 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 2.61 0.01 0.00 37.25 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 5.43 0.03 0.01 77.63 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 367.00 4.15 0.67 100.0 U2.6-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 57.00 0.37 0.10 25.56 ENST00000619323 lncRNA esophagus squamous epithelium (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 13845.00 90.40 25.27 97.83 ENST00000619323 lncRNA esophagus squamous epithelium (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 251.00 24.51 0.46 100.0 SCARNA4-202 scaRNA esophagus squamous epithelium (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 1215.00 41.98 2.22 100.0 ENST00000625572 miRNA esophagus squamous epithelium (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 20230.00 95.74 36.93 100.0 ENST00000628177 snoRNA esophagus squamous epithelium (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 5214.00 88.98 9.52 100.0 ENST00000630615 snoRNA esophagus squamous epithelium (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 168.00 44.80 0.31 100.0 DMRT2-209 protein coding esophagus squamous epithelium (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 93.00 24.80 0.17 100.0 DMRT2-209 protein coding esophagus squamous epithelium (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 388.00 27.25 0.71 100.0 SNORD98-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 756.00 53.09 1.38 100.0 SNORD98-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 78610.06 65.87 143.49 67.63 MIR106AHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 13.85 0.01 0.03 32.97 MIR106AHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 4.00 0.00 0.01 100.0 MIR106AHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 23.00 0.02 0.04 54.77 MIR106AHG-201 lncRNA esophagus squamous epithelium (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 918.00 48.60 1.68 100.0 MEG8-222 lncRNA esophagus squamous epithelium (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 311.00 16.46 0.57 100.0 MEG8-222 lncRNA esophagus squamous epithelium (Tissue)