ENCFF081QYT

Library Details

Organism: Homo Sapiens
Biosample: esophagus squamous epithelium (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR289GGY
Description: Part of ENCODE experiment ENCSR289GGY. The libraries contained in this Experiment come from tissue sub-sections of a 37 year old male's esophagus mucosa tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 2183.00 94.22 3.98 100.0 SNORD113-5-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 161.00 93.60 0.29 100.0 MIR15A-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 13.00 81.25 0.02 100.0 MIR376C-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 247.00 52.55 0.45 100.0 SNHG21-206 retained intron esophagus squamous epithelium (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 7513.00 95.79 13.71 100.0 SNORD11B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 4338.00 74.60 7.92 100.0 SNORD91B-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 14574.00 50.42 26.60 54.72 SNORD91A-201 snoRNA esophagus squamous epithelium (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 5780.00 48.29 10.55 97.83 MIR486-1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 76346.00 51.66 139.36 60.98 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 384.00 0.26 0.70 100.0 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 945.00 0.64 1.72 100.0 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 12631.00 8.55 23.06 76.5 NOP56-219 retained intron esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 317.00 2.28 0.58 57.32 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 1792.77 12.89 3.27 48.93 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 60.00 0.43 0.11 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 2924.00 21.03 5.34 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 42.00 0.30 0.08 100.0 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 385.00 2.77 0.70 54.84 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 1917.11 13.79 3.50 52.32 RNA5-8SN2-201 rRNA esophagus squamous epithelium (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 3.00 100.00 0.01 100.0 MIR7974-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 1.00 33.33 0.00 100.0 MIR376A1-201 miRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 476.00 2.58 0.87 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1386.21 7.51 2.53 36.14 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 31.00 0.17 0.06 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 1.00 0.01 0.00 100.0 U2.3-201 snRNA esophagus squamous epithelium (Tissue)