ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 496.00 77.38 21.24 100.0 SNORD113-9-201 snoRNA GM23248 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 6.00 0.85 0.26 100.0 SNORD38A-201 snoRNA GM23248 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 503.00 71.15 21.54 100.0 SNORD38A-201 snoRNA GM23248 (Cell line)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 138.00 19.52 5.91 100.0 SNORD38A-201 snoRNA GM23248 (Cell line)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 6405.00 85.65 274.22 94.99 SNORD114-20-201 snoRNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 234.00 29.77 10.02 79.05 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 40.00 5.09 1.71 78.43 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 119.00 15.14 5.09 65.03 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 5.00 0.64 0.21 100.0 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 7.00 0.89 0.30 100.0 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 66.00 8.40 2.83 51.56 7SK.1-201 misc RNA GM23248 (Cell line)
ENST00000365423.1 ENST00000365423.1_35_67_+ 35–67 4063.00 71.38 173.95 100.0 SNORD114-22-201 snoRNA GM23248 (Cell line)
ENST00000365423.1 ENST00000365423.1_4_67_+ 4–67 1377.00 24.19 58.95 92.48 SNORD114-22-201 snoRNA GM23248 (Cell line)
ENST00000365444.1 ENST00000365444.1_3_69_+ 3–69 2253.00 86.72 96.46 100.0 SNORD6-201 snoRNA GM23248 (Cell line)
ENST00000365444.1 ENST00000365444.1_30_69_+ 30–69 122.00 4.70 5.22 100.0 SNORD6-201 snoRNA GM23248 (Cell line)
ENST00000365484.1 ENST00000365484.1_1_95_+ 1–95 2.00 0.14 0.09 100.0 RNY3-201 misc RNA GM23248 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_48_+ 3–48 642.86 16.69 27.52 60.99 SNORD82-201 snoRNA GM23248 (Cell line)
ENST00000365530.1 ENST00000365530.1_37_67_+ 37–67 167.00 4.34 7.15 100.0 SNORD82-201 snoRNA GM23248 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_46_+ 3–46 460.18 11.95 19.70 43.66 SNORD82-201 snoRNA GM23248 (Cell line)
ENST00000365530.1 ENST00000365530.1_30_67_+ 30–67 219.00 5.69 9.38 77.39 SNORD82-201 snoRNA GM23248 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_39_+ 3–39 123.00 3.19 5.27 100.0 SNORD82-201 snoRNA GM23248 (Cell line)
ENST00000365530.1 ENST00000365530.1_3_29_+ 3–29 33.00 0.86 1.41 100.0 SNORD82-201 snoRNA GM23248 (Cell line)
ENST00000365530.1 ENST00000365530.1_4_67_+ 4–67 1819.00 47.22 77.88 99.67 SNORD82-201 snoRNA GM23248 (Cell line)
ENST00000365699.4 ENST00000365699.4_9_32_+ 9–32 1894.00 96.24 81.09 98.03 MIR146B-201 miRNA GM23248 (Cell line)
ENST00000366365.3 ENST00000366365.3_327_364_+ 327–364 2.00 28.57 0.09 100.0 SNHG20-201 lncRNA GM23248 (Cell line)