ENCFF062TYF

Library Details

Organism: Homo Sapiens
Biosample: GM23248 (Cell line)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR489KNQ
Description: Part of ENCODE experiment ENCSR489KNQ. The libraries contained in this experiment come from independent growths of skin fibroblasts. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 145.00 68.72 6.21 100.0 EHBP1-AS1-210 lncRNA GM23248 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 15.00 5.03 0.64 100.0 ENST00000770398 lncRNA GM23248 (Cell line)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 50.00 16.78 2.14 100.0 ENST00000770398 lncRNA GM23248 (Cell line)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 1.00 0.34 0.04 100.0 ENST00000770398 lncRNA GM23248 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 20.00 1.61 0.86 100.0 ENST00000771298 lncRNA GM23248 (Cell line)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 5.00 0.40 0.21 100.0 ENST00000771298 lncRNA GM23248 (Cell line)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 653.00 52.45 27.96 91.46 ENST00000771298 lncRNA GM23248 (Cell line)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 22.00 1.77 0.94 100.0 ENST00000771298 lncRNA GM23248 (Cell line)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 1.00 2.78 0.04 100.0 ENST00000772672 lncRNA GM23248 (Cell line)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 26.00 38.81 1.11 100.0 ENST00000773843 lncRNA GM23248 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1392_+ 1328–1392 11134.00 46.25 476.69 96.07 SNHG12-223 lncRNA GM23248 (Cell line)
ENST00000775062.1 ENST00000775062.1_1328_1395_+ 1328–1395 12794.00 53.15 547.76 99.19 SNHG12-223 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_205_232_+ 205–232 254.00 1.74 10.87 100.0 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_234_+ 161–234 5229.00 35.73 223.87 37.02 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_161_206_+ 161–206 26.00 0.18 1.11 100.0 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_176_234_+ 176–234 2.91 0.02 0.12 58.26 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_172_234_+ 172–234 5.13 0.04 0.22 57.05 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_174_234_+ 174–234 3.92 0.03 0.17 30.18 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_196_234_+ 196–234 35.00 0.24 1.50 74.47 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000776279.1 ENST00000776279.1_184_234_+ 184–234 4.00 0.03 0.17 100.0 SNHG25-206 lncRNA GM23248 (Cell line)
ENST00000779378.1 ENST00000779378.1_905_928_+ 905–928 126.00 78.75 5.39 92.65 MIR155HG-205 lncRNA GM23248 (Cell line)
ENST00000785178.1 ENST00000785178.1_899_938_+ 899–938 140.00 19.64 5.99 100.0 ENST00000785178 lncRNA GM23248 (Cell line)
ENST00000786284.1 ENST00000786284.1_38_80_+ 38–80 218.00 18.51 9.33 83.85 ENST00000786284 lncRNA GM23248 (Cell line)
ENST00000786284.1 ENST00000786284.1_46_80_+ 46–80 280.00 23.77 11.99 100.0 ENST00000786284 lncRNA GM23248 (Cell line)
ENST00000786284.1 ENST00000786284.1_40_80_+ 40–80 42.00 3.57 1.80 22.34 ENST00000786284 lncRNA GM23248 (Cell line)