ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000383884.1 ENST00000383884.1_1_75_+ 1–75 7854.00 79.46 23.41 100.0 SNORD24-201 snoRNA liver (Tissue)
ENST00000383924.1 ENST00000383924.1_85_107_+ 85–107 1632.00 89.72 4.86 100.0 Y_RNA.389-201 misc RNA liver (Tissue)
ENST00000384027.1 ENST00000384027.1_30_70_+ 30–70 823.00 0.70 2.45 100.0 SNORD101-201 snoRNA liver (Tissue)
ENST00000384027.1 ENST00000384027.1_42_70_+ 42–70 273.00 0.23 0.81 100.0 SNORD101-201 snoRNA liver (Tissue)
ENST00000384027.1 ENST00000384027.1_2_73_+ 2–73 11993.00 10.27 35.75 86.55 SNORD101-201 snoRNA liver (Tissue)
ENST00000384027.1 ENST00000384027.1_3_70_+ 3–70 99017.00 84.77 295.17 98.39 SNORD101-201 snoRNA liver (Tissue)
ENST00000384048.1 ENST00000384048.1_1_66_+ 1–66 50369.00 97.45 150.15 100.0 SNORD37-201 snoRNA liver (Tissue)
ENST00000384304.1 ENST00000384304.1_2_72_+ 2–72 68924.00 81.91 205.46 97.33 SNORD59A-201 snoRNA liver (Tissue)
ENST00000384360.1 ENST00000384360.1_1_47_+ 1–47 391.00 18.64 1.17 100.0 SNORA7B-201 snoRNA liver (Tissue)
ENST00000384390.1 ENST00000384390.1_1_87_+ 1–87 4843.00 81.44 14.44 100.0 SNORD14D-201 snoRNA liver (Tissue)
ENST00000384673.1 ENST00000384673.1_82_107_+ 82–107 404.00 29.21 1.20 100.0 Y_RNA.555-201 misc RNA liver (Tissue)
ENST00000384816.1 ENST00000384816.1_52_73_+ 52–73 38022.00 91.53 113.34 93.1 MIR25-201 miRNA liver (Tissue)
ENST00000384819.1 ENST00000384819.1_7_28_+ 7–28 32233.00 92.38 96.09 95.55 MIR99B-201 miRNA liver (Tissue)
ENST00000384832.1 ENST00000384832.1_58_81_+ 58–81 3162.00 40.03 9.43 63.11 MIR23B-201 miRNA liver (Tissue)
ENST00000384832.1 ENST00000384832.1_58_78_+ 58–78 4146.00 52.48 12.36 86.83 MIR23B-201 miRNA liver (Tissue)
ENST00000384836.1 ENST00000384836.1_66_87_+ 66–87 231.00 47.14 0.69 100.0 MIR203A-201 miRNA liver (Tissue)
ENST00000384849.1 ENST00000384849.1_26_48_+ 26–48 5412.00 12.98 16.13 100.0 MIR199B-201 miRNA liver (Tissue)
ENST00000384849.1 ENST00000384849.1_65_85_+ 65–85 32310.00 77.52 96.32 91.36 MIR199B-201 miRNA liver (Tissue)
ENST00000384850.1 ENST00000384850.1_17_38_+ 17–38 12121.00 92.86 36.13 100.0 MIR30B-201 miRNA liver (Tissue)
ENST00000384853.1 ENST00000384853.1_36_58_+ 36–58 330.00 82.09 0.98 100.0 MIR181D-201 miRNA liver (Tissue)
ENST00000384857.1 ENST00000384857.1_61_83_+ 61–83 1.00 25.00 0.00 100.0 MIR508-201 miRNA liver (Tissue)
ENST00000384858.1 ENST00000384858.1_27_48_+ 27–48 261.00 39.01 0.78 100.0 MIR215-201 miRNA liver (Tissue)
ENST00000384863.1 ENST00000384863.1_77_98_+ 77–98 828.00 0.41 2.47 100.0 MIR181A2-201 miRNA liver (Tissue)
ENST00000384873.3 ENST00000384873.3_16_38_+ 16–38 137609.00 98.33 410.21 99.37 MIR191-201 miRNA liver (Tissue)
ENST00000384879.1 ENST00000384879.1_15_37_+ 15–37 55.00 61.80 0.16 76.39 MIR149-201 miRNA liver (Tissue)