ENCFF001RTU

Library Details

Organism: Homo Sapiens
Biosample: liver (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFV
Description: Part of ENCODE experiment ENCSR000AFV. The libraries contained in this experiment come from human fetal liver tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000384881.1 ENST00000384881.1_27_48_+ 27–48 1898.00 87.43 5.66 95.86 MIR181C-201 miRNA liver (Tissue)
ENST00000384881.1 ENST00000384881.1_66_87_+ 66–87 126.00 5.80 0.38 100.0 MIR181C-201 miRNA liver (Tissue)
ENST00000384892.1 ENST00000384892.1_15_36_+ 15–36 29918.00 90.43 89.19 100.0 MIR194-1-201 miRNA liver (Tissue)
ENST00000384893.1 ENST00000384893.1_52_72_+ 52–72 2304.00 80.19 6.87 83.06 MIR128-2-201 miRNA liver (Tissue)
ENST00000384906.1 ENST00000384906.1_13_34_+ 13–34 5054.00 82.93 15.07 94.36 MIR99A-201 miRNA liver (Tissue)
ENST00000384918.1 ENST00000384918.1_14_35_+ 14–35 4922.00 11.42 14.67 84.05 MIR28-201 miRNA liver (Tissue)
ENST00000384918.1 ENST00000384918.1_54_71_+ 54–71 208.00 0.48 0.62 100.0 MIR28-201 miRNA liver (Tissue)
ENST00000384918.1 ENST00000384918.1_54_75_+ 54–75 33802.00 78.46 100.76 93.14 MIR28-201 miRNA liver (Tissue)
ENST00000384958.1 ENST00000384958.1_27_48_+ 27–48 214.00 71.10 0.64 100.0 MIR183-201 miRNA liver (Tissue)
ENST00000384967.1 ENST00000384967.1_16_38_+ 16–38 1028.00 73.69 3.06 100.0 MIR145-201 miRNA liver (Tissue)
ENST00000384967.1 ENST00000384967.1_56_76_+ 56–76 151.00 10.82 0.45 100.0 MIR145-201 miRNA liver (Tissue)
ENST00000384988.1 ENST00000384988.1_15_36_+ 15–36 20022.00 95.27 59.69 97.3 MIR186-201 miRNA liver (Tissue)
ENST00000384997.3 ENST00000384997.3_57_79_+ 57–79 1777.00 87.67 5.30 100.0 MIR200B-201 miRNA liver (Tissue)
ENST00000384999.1 ENST00000384999.1_25_46_+ 25–46 192.00 74.13 0.57 100.0 MIR218-1-201 miRNA liver (Tissue)
ENST00000385004.1 ENST00000385004.1_16_38_+ 16–38 16991.00 88.35 50.65 93.25 MIR181B2-201 miRNA liver (Tissue)
ENST00000385010.3 ENST00000385010.3_50_71_+ 50–71 539.00 45.87 1.61 100.0 MIR495-201 miRNA liver (Tissue)
ENST00000385011.1 ENST00000385011.1_27_48_+ 27–48 27760.00 89.91 82.75 90.43 MIR10B-201 miRNA liver (Tissue)
ENST00000385018.1 ENST00000385018.1_51_73_+ 51–73 1072.93 55.16 3.20 64.21 MIR130B-201 miRNA liver (Tissue)
ENST00000385018.1 ENST00000385018.1_51_71_+ 51–71 842.62 43.32 2.51 46.97 MIR130B-201 miRNA liver (Tissue)
ENST00000385018.1 ENST00000385018.1_13_34_+ 13–34 97.00 4.99 0.29 100.0 MIR130B-201 miRNA liver (Tissue)
ENST00000385019.1 ENST00000385019.1_6_28_+ 6–28 10663.00 22.50 31.79 100.0 MIR199A1-201 miRNA liver (Tissue)
ENST00000385021.3 ENST00000385021.3_51_72_+ 51–72 6070.00 74.93 18.09 100.0 MIR487B-201 miRNA liver (Tissue)
ENST00000385024.1 ENST00000385024.1_11_33_+ 11–33 8539.72 63.68 25.46 66.57 MIR93-201 miRNA liver (Tissue)
ENST00000385024.1 ENST00000385024.1_11_31_+ 11–31 4277.14 31.89 12.75 38.76 MIR93-201 miRNA liver (Tissue)
ENST00000385025.1 ENST00000385025.1_20_41_+ 20–41 3174.00 82.76 9.46 91.97 MIR532-201 miRNA liver (Tissue)